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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSMAP00000005169Proline-rich nuclear receptor coactivator 2. (156 aa)    
Predicted Functional Partners:
SMAX5B_003253
Putative mRNA-decapping enzyme 1A.
    
 0.949
SMAX5B_007738
mRNA_decap_C domain-containing protein.
    
 0.936
SMAX5B_002957
Putative m7GpppN-mRNA hydrolase isoform 3.
    
 
 0.807
SMAX5B_004218
Uncharacterized protein.
     
 0.806
ENSSMAP00000008250
UPF1 RNA helicase and ATPase.
    
 0.797
UPF1
UPF1 RNA helicase and ATPase.
    
 0.797
SMAX5B_013888
PINc domain-containing protein.
     
 0.752
UPF2
Putative regulator of nonsense transcripts 2.
     
 0.739
SMAX5B_009161
Uncharacterized protein.
     
 0.711
SMAX5B_022148
EST1 DNA bind multi-domain protein.
     
 0.694
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.