STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_002546Putative rhomboid-related protein 2; Belongs to the peptidase S54 family. (298 aa)    
Predicted Functional Partners:
SMAX5B_009807
Putative N-acetylgalactosamine kinase.
    
  0.512
ENSSMAP00000030278
Galactokinase 1.
    
  0.512
SMAX5B_004217
Putative ubiquitin-associated and SH3 domain-containing protein B-like.
    
  0.510
SMAX5B_008462
Putative ubiquitin-associated and SH3 domain-containing protein B.
    
  0.510
SMAX5B_008464
Putative glucuronokinase 1-like.
    
  0.510
SMAX5B_012552
Putative methenyltetrahydrofolate synthase domain-containing protein.
  
    0.503
SMAX5B_021202
5-formyltetrahydrofolate cyclo-ligase; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family.
  
    0.503
NCSTN
Putative nicastrin.
      
 0.499
SMAX5B_010003
Putative stomatin-like protein 1 isoform 2.
  
 0.474
SMAX5B_005556
Putative membrane-associated guanylate kinase WW and PDZ domain-containing protein 3-like.
   
 
 0.469
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.