Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
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textmining
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SMAX5B_003708ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. DDX54/DBP10 subfamily. (871 aa)    
Predicted Functional Partners:
FTSJ3
pre-rRNA processing protein FTSJ3; Probable methyltransferase involved in the processing of the 34S pre-rRNA to 18S rRNA and in 40S ribosomal subunit formation. Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily.
  
 0.995
PES1
Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.991
SMAX5B_014880
Putative nucleolar complex protein 2-like.
   
 
 0.991
SMAX5B_019505
Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.
   
 
 0.990
SMAX5B_005573
Putative ATP-dependent RNA helicase DDX27; Belongs to the DEAD box helicase family.
  
 
0.990
ENSSMAP00000000460
WD repeat domain 12.
   
 0.988
SMAX5B_000267
Putative ATP-dependent RNA helicase DDX24 isoform 2.
  
 
0.988
SMAX5B_002968
Putative pumilio domain-containing protein KIAA0020-like.
   
 
 0.987
SMAX5B_015232
Ribosomal_L28e domain-containing protein.
   
 
 0.987
SMAX5B_022461
Putative rRNA-processing protein EBP2.
   
 0.987
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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