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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_009714Putative calumenin. (315 aa)    
Predicted Functional Partners:
SMAX5B_020440
Putative extracellular serine/threonine protein kinase FAM20C-like.
    
  0.669
SMAX5B_020917
Putative extracellular serine/threonine protein kinase FAM20C-like.
    
  0.669
ENSSMAP00000028882
FAM20B glycosaminoglycan xylosylkinase.
     
 0.615
SMAX5B_009951
94 kD glucose-regulated protein.
   
 0.579
SMAX5B_006175
Putative extracellular serine/threonine protein kinase FAM20C-like.
    
  0.577
SMAX5B_011518
Putative extracellular serine/threonine protein kinase FAM20C-like.
    
  0.577
SMAX5B_000946
Calreticulin.
   
 
 0.552
ENSSMAP00000010550
Calreticulin.
   
 
 0.552
SMAX5B_005848
Calreticulin.
   
 
 0.552
SMAX5B_015302
Putative dnaJ-like subfamily C member 10.
   
 
 0.510
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.