STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TNFRSF11BTNFR-Cys domain-containing protein. (418 aa)    
Predicted Functional Partners:
SMAX5B_010270
Putative tumor necrosis factor ligand superfamily member 11; Belongs to the tumor necrosis factor family.
   
 0.995
SMAX5B_021896
Putative tumor necrosis factor ligand superfamily member 10; Belongs to the tumor necrosis factor family.
     
 0.902
ENSSMAP00000023783
annotation not available
   
 0.884
SMAX5B_007510
Tumor necrosis factor superfamily member 14 isoform 3; Belongs to the tumor necrosis factor family.
   
 0.863
TNF
Tumor necrosis factor alpha.
   
 0.863
SMAX5B_022032
Putative B-and T-lymphocyte attenuator-like.
   
 0.816
SMAX5B_003183
Putative tumor necrosis factor receptor superfamily member 6B-like.
  
  
 
0.815
SMAX5B_002101
Tumor necrosis factor receptor superfamily member 11A.
   
 0.743
SMAX5B_006657
Putative E3 ubiquitin-protein ligase TRAF7.
    
 0.673
SMAX5B_021798
Putative TNF receptor-associated factor 3.
    
 0.671
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.