STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_010559MHC class II beta antigen. (292 aa)    
Predicted Functional Partners:
SMAX5B_008837
Putative osmotic avoidance abnormal protein 3-like.
   
 0.973
ENSSMAP00000001440
annotation not available
    
  0.966
SMAX5B_006648
Ig-like domain-containing protein.
   
  0.966
ENSSMAP00000010155
annotation not available
   
  0.960
SMAX5B_021508
40S ribosomal protein S14 isoform 2; Belongs to the universal ribosomal protein uS11 family.
   
 0.955
ENSSMAP00000005372
Zgc:123107.
 
 0.932
ENSSMAP00000017475
annotation not available
    
 0.925
ENSSMAP00000017542
Immunoglobulin heavy variable 1-4.
    
 0.925
SMAX5B_012158
T-cell surface glycoprotein.
   
 0.899
ENSSMAP00000001395
annotation not available
    
  0.869
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.