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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_006050Uncharacterized protein. (634 aa)    
Predicted Functional Partners:
SMAX5B_010186
Putative E3 ubiquitin-protein ligase TRIP12-like isoform 2.
    
 
 0.677
SMAX5B_018876
Uncharacterized protein.
    
 
 0.642
SMAX5B_017548
Putative chromatin complexes subunit BAP18-like isoform 3.
    
 
 0.597
SMAX5B_011599
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5.
    
 
 0.533
SMAX5B_009401
P-type phospholipid transporter.
      
 0.530
SMAX5B_005947
Putative FAD-dependent oxidoreductase domain-containing protein 2.
      
 0.519
SMAX5B_017972
Putative cell division cycle and apoptosis regulator protein 1 isoform 2.
      
 0.517
SMAX5B_006131
DNA helicase; Belongs to the MCM family.
      
 0.483
ENSSMAP00000023715
Multiple EGF-like-domains 6b.
      
 0.476
SMAX5B_001641
Putative junction plakoglobin-like.
   
 0.462
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.