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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSMAP00000005607Transmembrane protein 192. (263 aa)    
Predicted Functional Partners:
SMAX5B_016368
Putative SPRY domain-containing protein 4.
   
   0.823
SMAX5B_013429
Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.
   
 0.771
SMAX5B_011550
Coronin; Belongs to the WD repeat coronin family.
   
 0.770
GOSR1
Golgi SNAP receptor complex member 1 isoform 2.
   
 0.769
SMAX5B_009437
Syntaxin 5A isoform 2; Belongs to the PDGF/VEGF growth factor family.
    
 0.768
SMAX5B_003685
Putative golgin subfamily A member 2.
   
 
 0.719
SMAX5B_008560
Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome.
    
 0.716
SMAX5B_021143
Ras-related protein Rab-11A.
  
 0.711
SMAX5B_006233
Ras-related protein Rab-11B.
  
 0.711
SMAX5B_013550
Fc54g10 wu:fc54g10 isoform 2.
  
 0.711
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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