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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_005750Uncharacterized protein; Belongs to the ubiquitin-conjugating enzyme family. (238 aa)    
Predicted Functional Partners:
SMAX5B_015038
Putative ubiquitin-conjugating enzyme E2 variant 1-like isoform 2.
   
 0.964
ENSSMAP00000008002
Ribosomal protein S27a.
   
 0.945
SMAX5B_006467
Putative RING-box protein 1-like.
   
 0.939
ENSSMAP00000000415
annotation not available
   
 0.930
ENSSMAP00000014581
annotation not available
   
 0.930
SMAX5B_010186
Putative E3 ubiquitin-protein ligase TRIP12-like isoform 2.
   
 0.927
SMAX5B_007423
Putative ubiquitin-like modifier-activating enzyme 6 isoform 2.
   
 0.914
SMAX5B_014849
Putative ubiquitin-like modifier-activating enzyme 1 isoform 2; Belongs to the ubiquitin-activating E1 family.
   
 0.912
SMAX5B_002201
Putative ubiquitin-like modifier-activating enzyme 1; Belongs to the ubiquitin-activating E1 family.
   
 0.912
SMAX5B_009686
Cullin-1; Belongs to the cullin family.
    
 0.908
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.