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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_000537Putative beta-lactamase-like 1. (557 aa)    
Predicted Functional Partners:
SMAX5B_013709
Putative cytochrome b5 reductase 4.
    
 0.820
NRXN2
Putative neurexin-2-like.
   
 0.710
SMAX5B_001362
Putative neurexin-2-like.
   
 0.710
SMAX5B_002418
Peripheral plasma membrane protein CASK; Belongs to the MAGUK family.
   
 0.706
CASK
Peripheral plasma membrane protein CASK.
   
 0.706
SMAX5B_008346
Putative neurexin-3b.
    
 0.705
SMAX5B_017382
Putative neurexin-1a-like.
    
 0.705
SMAX5B_017940
Putative neurexin-1a-like.
    
 0.705
SMAX5B_016906
Putative neurexin 3.
    
 0.705
CPQ
Putative carboxypeptidase Q.
  
 0.644
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.