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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SNIP1Putative smad nuclear-interacting protein 1. (364 aa)    
Predicted Functional Partners:
SMAX5B_018887
RRM domain-containing protein.
   
 0.999
ENSSMAP00000016352
BUD13 homolog.
   
 0.996
SMAX5B_011043
U5 small nuclear ribonucleoprotein 200 kDa helicase.
   
 
 0.994
SMAX5B_008261
SNW domain-containing protein 1.
    
 
 0.991
SMAX5B_010234
Splicing factor 3B subunit 1.
    
 
 0.980
SMAX5B_018533
Putative pre-mRNA-splicing factor CWC22-like.
   
 
 0.971
SMAX5B_020105
Putative PHD finger-like domain-containing protein 5A isoform 2.
    
 
 0.969
SMAX5B_016956
Putative peptidyl-prolyl cis-trans isomerase CWC27-like.
   
 0.966
SMAX5B_011155
RING finger protein 113A isoform 2.
   
 
 0.963
SMAX5B_003663
Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16.
    
 0.963
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.