STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSMAP00000005818annotation not available (227 aa)    
Predicted Functional Partners:
SMAX5B_017287
Beclin-1.
    
 0.918
SMAX5B_021633
Phosphatidylinositol 3-kinase catalytic subunit type 3.
    
 0.917
SMAX5B_011077
Putative phosphoinositide 3-kinase regulatory subunit 4.
    
 0.917
SMAX5B_013597
Autophagy-related protein 13; Belongs to the ATG13 family. Metazoan subfamily.
   
 0.911
SMAX5B_005970
Putative RB1-inducible coiled-coil protein 1.
    
 0.908
SMAX5B_004844
Autophagy-related protein 101 isoform 2.
    
 0.887
ENSSMAP00000029493
ATG9 autophagy related 9 homolog A (S. cerevisiae).
   
 0.879
SMAX5B_006652
Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family.
   
 0.879
SMAX5B_021784
Putative beclin 1-associated autophagy-related key regulator.
    
 0.875
ATG2B
Putative autophagy-related protein 2-like B.
   
 0.870
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.