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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_007842Uncharacterized protein. (557 aa)    
Predicted Functional Partners:
SMAX5B_013843
Putative nucleolar protein 14.
   
 
 0.999
SMAX5B_001114
Putative WD repeat-containing protein 3.
   
 
 0.999
SMAX5B_005010
Putative DDB1-and CUL4-associated factor 13.
   
   0.999
NAT10
RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein THUMPD1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.
   
 
 0.999
SMAX5B_014812
Putative WD repeat-containing protein 46 isoform 2.
   
 
 0.999
SMAX5B_015972
Putative nucleolar protein 10.
   
 
 0.999
SMAX5B_002206
Putative something about silencing protein 10.
   
 
 0.999
SMAX5B_000564
Putative WD repeat-containing protein 43-like.
   
 
 0.999
SMAX5B_021709
Putative U3 small nucleolar RNA-associated protein 14-like A-like.
   
 
 0.999
SMAX5B_016683
Putative ribosome biogenesis protein BMS1-like isoform 2.
   
 
 0.999
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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