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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_000649Putative sacsin-like. (4580 aa)    
Predicted Functional Partners:
ENSSMAP00000021641
annotation not available
   
 0.910
SMAX5B_009952
Putative ubiquitin-conjugating enzyme E2 variant 3.
    
 0.874
SMAX5B_009275
Aurora kinase B; Belongs to the protein kinase superfamily.
   
 0.851
SMAX5B_005156
Serine/threonine-protein kinase 6; Belongs to the protein kinase superfamily.
   
 0.851
SMAX5B_019842
Putative diablo-like mitochondrial-like.
    
 0.837
SMAX5B_019907
Putative diablo-like mitochondrial-like.
    
 0.837
ENSSMAP00000008002
Ribosomal protein S27a.
   
 0.836
SMAX5B_016724
Apoptotic protease-activating factor 1; Oligomeric Apaf-1 mediates the cytochrome c-dependent autocatalytic activation of pro-caspase-9 (Apaf-3), leading to the activation of caspase-3 and apoptosis. This activation requires ATP.
   
 0.832
SMAX5B_003918
ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.
   
 0.812
SMAX5B_018443
F1-ATPase beta-subunit.
   
 0.812
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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