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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_000060Putative N-acetyltransferase ESCO2-like. (659 aa)    
Predicted Functional Partners:
SMAX5B_007441
Putative structural maintenance of chromosomes protein 3.
   
 0.982
RBM20
Putative RNA-binding protein 20.
   
 0.962
SMAX5B_007464
Structural maintenance of chromosomes protein.
   
 0.932
SMAX5B_006753
Putative sister chromatid cohesion protein PDS5-like B.
   
 0.928
SMAX5B_007594
Putative sister chromatid cohesion protein PDS5-like A.
   
 0.928
SMAX5B_014476
Structural maintenance of chromosomes protein.
   
 0.924
SMAX5B_013358
Structural maintenance of chromosomes protein.
   
 0.918
SMAX5B_022116
Structural maintenance of chromosomes protein.
   
 0.916
SMAX5B_010392
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.916
SMAX5B_014933
Putative structural maintenance of chromosomes protein 5-like isoform 2.
   
 0.906
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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