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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_007971Putative carnitine O-palmitoyltransferase 2 mitochondrial; Belongs to the carnitine/choline acetyltransferase family. (669 aa)    
Predicted Functional Partners:
SMAX5B_001441
Putative very long-chain specific acyl-CoA dehydrogenase mitochondrial.
   
 0.957
SMAX5B_006015
Putative medium-chain specific acyl-CoA dehydrogenase mitochondrial.
   
 0.954
SMAX5B_011264
Putative acyl-CoA dehydrogenase family member 9 mitochondrial.
   
 0.950
SMAX5B_007470
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
   
 0.947
SMAX5B_022710
Putative long-chain specific acyl-CoA dehydrogenase mitochondrial isoform 3.
   
 0.938
SMAX5B_004520
Putative isobutyryl-CoA dehydrogenase mitochondrial.
   
 0.922
SMAX5B_011031
Putative very long-chain specific acyl-CoA dehydrogenase mitochondrial-like isoform 2; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family.
   
 0.921
SMAX5B_017549
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
   
 0.919
SMAX5B_001552
Putative acyl-CoA dehydrogenase family member 11.
   
 0.901
SMAX5B_000514
Putative isovaleryl-CoA dehydrogenase mitochondrial.
   
 0.898
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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