STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_022619Putative obscurin-like isoform 2. (788 aa)    
Predicted Functional Partners:
SMAX5B_005888
Putative UBX domain-containing protein 7.
   
 0.967
ENSSMAP00000034949
IST1 factor associated with ESCRT-III.
    
 0.875
SMAX5B_000293
Putative charged multivesicular body protein 3.
   
 0.863
SMAX5B_010521
Ubiquitin fusion degradation protein 1-like isoform 2.
    
 0.857
ENSSMAP00000003318
YOD1 deubiquitinase.
   
 0.823
SMAX5B_009276
Putative UBX domain-containing protein 1.
   
 0.819
SMAX5B_020186
Putative Fanconi anemia-associated protein of 100 kDa.
    
 0.812
SMAX5B_020637
Nploc4 protein.
    
 0.812
SMAX5B_022539
Putative FAS-associated factor 1.
   
 0.809
SMAX5B_019123
FAS-associated factor 2 isoform 3.
   
 0.809
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.