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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_008903Putative nucleoside diphosphate kinase-like 5; Belongs to the NDK family. (208 aa)    
Predicted Functional Partners:
SMAX5B_002561
Putative 28S ribosomal protein S12 mitochondrial isoform 2; Belongs to the universal ribosomal protein uS12 family.
  
 0.948
ENSSMAP00000012626
Cytidylate kinase.
 
 
 0.948
SMAX5B_019627
Putative 28S ribosomal protein S10 mitochondrial isoform 2.
  
  0.946
SMAX5B_002543
28S ribosomal protein S15 mitochondrial; Belongs to the universal ribosomal protein uS15 family.
  
 0.945
ENSSMAP00000024134
Mitochondrial ribosomal protein S16.
  
 0.943
SMAX5B_016882
Putative 28S ribosomal protein S6 mitochondrial.
   
  0.939
SMAX5B_013115
Putative 28S ribosomal protein S11 mitochondrial-like; Belongs to the universal ribosomal protein uS11 family.
  
 0.927
ENSSMAP00000017446
Mitochondrial ribosomal protein S9.
  
  0.926
RPS20
40S ribosomal protein S20 isoform 2.
  
 0.924
SMAX5B_002795
40S ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family.
  
 0.924
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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