STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_008300Putative F-box only protein 16. (272 aa)    
Predicted Functional Partners:
SMAX5B_004110
S-phase kinase-associated protein 1-like protein; Belongs to the SKP1 family.
    
 0.987
SMAX5B_000774
Putative peroxisomal NADH pyrophosphatase NUDT12.
    
  0.831
SMAX5B_021276
Putative cell division control protein 6-like.
    
 0.817
SMAX5B_006467
Putative RING-box protein 1-like.
    
 0.816
SMAX5B_010176
Putative RING-box protein 2-like isoform 3.
    
 0.816
SMAX5B_009686
Cullin-1; Belongs to the cullin family.
    
 0.792
SMAX5B_016810
Putative 39S ribosomal protein L2 mitochondrial.
    
 0.792
CUL3
Cullin-3; Belongs to the cullin family.
    
 0.761
SMAX5B_008761
Putative myopalladin; Belongs to the cullin family.
    
 0.761
SMAX5B_003815
Cullin-3; Belongs to the cullin family.
    
 0.761
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.