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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_006000Putative nucleosome-remodeling factor subunit BPTF-like. (3442 aa)    
Predicted Functional Partners:
SMAX5B_011599
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5.
   
 
 0.920
SMAX5B_011741
Putative histone-lysine N-methyltransferase SETD2 isoform 2.
   
 
0.804
SMAX5B_014401
Putative lymphoid-specific helicase.
   
 
 0.790
SMAX5B_007879
Putative chromodomain-helicase-DNA-binding protein 1-like.
   
 
 0.790
SMAX5B_017999
Putative PHD finger protein 3 isoform 3.
   
   
0.787
SMAX5B_003570
Nipped-B protein.
   
    0.784
SMAX5B_016539
Nipped-B protein.
   
    0.784
SMAX5B_000354
Histone-binding protein RBBP4.
    
 
 0.755
SMAX5B_002919
Histone-binding protein RBBP7.
    
 
 0.755
SMAX5B_006941
WD_REPEATS_REGION domain-containing protein.
    
 
 0.755
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.