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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_007150Putative G1/S-specific cyclin-D1; Belongs to the cyclin family. (294 aa)    
Predicted Functional Partners:
SMAX5B_014088
Putative cyclin-dependent kinase 4 isoform 2; Belongs to the protein kinase superfamily.
   
 0.964
cdk6
Cyclin-dependent kinase 6; Belongs to the protein kinase superfamily.
   
 0.964
SMAX5B_004320
Putative short transient receptor potential channel 2-like; Belongs to the transient receptor (TC 1.A.4) family.
    
 0.948
SMAX5B_002387
Putative cyclin-dependent kinase inhibitor 1-like.
   
 0.947
SMAX5B_008066
Putative retinoblastoma-like protein 1.
    
 0.941
ENSSMAP00000014869
annotation not available
    
 0.941
CDKN1C
Putative cyclin-dependent kinase inhibitor 1C-like.
   
 0.939
SMAX5B_005507
Putative cyclin-dependent kinase inhibitor 1-like.
   
 0.939
ENSSMAP00000029694
annotation not available
   
 0.939
SMAX5B_010392
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
    
 0.930
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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