STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_011719Putative iroquois-class homeodomain protein irx-4-like. (488 aa)    
Predicted Functional Partners:
SMAX5B_015769
Putative teashirt-like 1-like.
    
 0.663
SMAX5B_012814
Putative teashirt-like 3.
   
 0.646
SMAX5B_003204
Putative teashirt-like 3.
   
 0.646
TSHZ1
Putative teashirt-like 1.
    
 0.644
SMAX5B_014890
Uncharacterized protein.
    
 0.644
SMAX5B_020827
Pbx4 homeodomain protein.
    
0.591
ENSSMAP00000005528
pre-B-cell leukemia homeobox 1b.
    
0.591
SMAX5B_010831
Pre-B-cell leukemia transcription factor 3.
    
 0.591
SMAX5B_013994
Pre-B-cell leukemia transcription factor 2.
    
0.591
SMAX5B_007956
Putative pre-B-cell leukemia transcription factor 1.
    
0.591
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.