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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_010632Putative golgin subfamily B member 1. (2980 aa)    
Predicted Functional Partners:
SMAX5B_013429
Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.
   
 0.928
SMAX5B_009437
Syntaxin 5A isoform 2; Belongs to the PDGF/VEGF growth factor family.
    
 0.926
SMAX5B_011550
Coronin; Belongs to the WD repeat coronin family.
   
 0.907
SMAX5B_003685
Putative golgin subfamily A member 2.
   
 
 0.880
SMAX5B_010613
Putative actin-related protein 2-B-like; Belongs to the actin family.
   
 0.877
SMAX5B_008765
Actin-related protein 2; ATP-binding component of the Arp2/3 complex, a multiprotein complex that mediates actin polymerization upon stimulation by nucleation-promoting factor (NPF). The Arp2/3 complex mediates the formation of branched actin networks in the cytoplasm, providing the force for cell motility. Seems to contact the pointed end of the daughter actin filament.
   
 0.877
WHAMM
Putative WASP-like-associated protein with actin membranes and microtubules.
   
 0.872
SMAX5B_021672
Actin-related protein 3; Belongs to the actin family.
   
 0.860
ENSSMAP00000017373
Actin related protein 3.
   
 0.860
SMAX5B_009892
Putative tight junction protein ZO-1 isoform 2; Belongs to the MAGUK family.
    
 0.859
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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