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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_002807Retinoblastoma-binding protein 5. (571 aa)    
Predicted Functional Partners:
SMAX5B_016962
Ash2-like.
    
 0.999
SMAX5B_021577
Uncharacterized protein.
    
 0.999
SMAX5B_015078
Putative WD repeat-containing protein 5.
   
0.995
ENSSMAP00000008002
Ribosomal protein S27a.
    
  0.987
SMAX5B_003621
Histone-lysine N-methyltransferase.
    
 0.978
SMAX5B_010941
Putative histone-lysine N-methyltransferase SETD1B-like.
    
 0.978
SMAX5B_011160
Putative histone-lysine N-methyltransferase SETD1A-like.
    
 0.978
SMAX5B_011721
Putative histone-lysine N-methyltransferase 2B.
    
 0.977
SMAX5B_015892
Putative histone-lysine N-methyltransferase 2B-like.
    
 0.977
SMAX5B_002416
Putative lysine-specific demethylase 6A-like.
    
 0.977
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.