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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_019959Putative tripartite motif-containing protein 3-like isoform 2. (771 aa)    
Predicted Functional Partners:
ENSSMAP00000008002
Ribosomal protein S27a.
    
  0.807
ENSSMAP00000000415
annotation not available
   
  0.776
ENSSMAP00000014581
annotation not available
   
  0.776
SMAX5B_016684
Putative ubiquitin-conjugating enzyme E2 D4-like isoform 2; Belongs to the ubiquitin-conjugating enzyme family.
   
  0.680
SMAX5B_017238
Ubiquitin conjugating enzyme E2 17 kDa; Belongs to the ubiquitin-conjugating enzyme family.
   
  0.680
ENSSMAP00000009944
Ubiquitin-conjugating enzyme E2D 4 (putative).
   
  0.680
ENSSMAP00000013832
Ubiquitin-conjugating enzyme E2D 3.
   
  0.680
SMAX5B_019213
Putative ubiquitin-conjugating enzyme E2 D2; Belongs to the ubiquitin-conjugating enzyme family.
   
  0.680
UBE2D1
Ubiquitin-conjugating enzyme E2 D4; Belongs to the ubiquitin-conjugating enzyme family.
   
  0.680
SMAX5B_008715
DExD/H box RNA helicase.
   
  0.637
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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