close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSMAP00000006397Collagen, type V, alpha 3a. (1673 aa)    
Predicted Functional Partners:
SMAX5B_007298
Uncharacterized protein.
    
  0.763
ENSSMAP00000005049
annotation not available
  
  0.745
ENSSMAP00000016815
annotation not available
  
 
0.627
ENSSMAP00000021267
Collagen, type VI, alpha 2.
  
 
0.625
SMAX5B_001923
Putative regulatory-associated protein of mTOR.
    
 0.615
ENSSMAP00000021462
Collagen, type VI, alpha 1.
  
0.609
SMAX5B_013855
Putative laminin subunit gamma-3-like.
   
 0.606
ENSSMAP00000014343
MTOR associated protein, LST8 homolog (S. cerevisiae).
    
  0.597
SMAX5B_015389
Uncharacterized protein.
    
  0.597
ENSSMAP00000017200
annotation not available
    
 0.576
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.