Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSMAP00000006397Collagen, type V, alpha 3a. (1673 aa)    
Predicted Functional Partners:
SMAX5B_019619
Putative adenylate kinase 9 isoform 2.
    
   0.645
ENSSMAP00000021462
Collagen, type VI, alpha 1.
   
  0.496
SMAX5B_010392
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
    
 0.480
SMAX5B_011995
Putative integrin alpha-8; Belongs to the integrin alpha chain family.
    
 0.460
ENSSMAP00000005049
annotation not available
  
  0.454
SMAX5B_014234
Putative sulfite oxidase mitochondrial.
    
   0.431
SMAX5B_016516
SPARC isoform 2.
   
 0.428
ENSSMAP00000017200
annotation not available
    
 0.427
SMAX5B_002159
Putative histone-lysine N-methyltransferase SETDB2.
    
  0.411
SMAX5B_012015
Putative histone-lysine N-methyltransferase SETDB1.
    
  0.411
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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