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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_017983Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (382 aa)    
Predicted Functional Partners:
SMAX5B_004808
Putative spindle and kinetochore-associated protein 2-like.
   
 
 0.673
SMAX5B_007148
Putative spindle and kinetochore-associated protein 1 isoform 2.
   
 
 0.665
SMAX5B_016718
Putative cytoskeleton-associated protein 4.
   
 
 0.654
CLSPN
Putative claspin isoform 2.
   
 
 0.621
SMAX5B_014144
Uncharacterized protein.
   
 
 0.618
SMAX5B_002507
TIMELESS-interacting protein; Plays an important role in the control of DNA replication and the maintenance of replication fork stability. Belongs to the CSM3 family.
   
 
 0.611
ENSSMAP00000028620
Replication protein A3.
   
   0.603
SMAX5B_001287
Putative E3 ubiquitin-protein ligase RFWD3.
    
   0.596
SMAX5B_008977
Putative vacuolar protein 8-like isoform 2.
    
 
 0.574
SMAX5B_003933
Putative DNA annealing helicase and endonuclease ZRANB3.
    
 
 0.497
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.