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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_022460Putative E3 ubiquitin-protein ligase RNF220-like. (483 aa)    
Predicted Functional Partners:
SMAX5B_022561
BRG1/brm-associated factor 53A; Belongs to the actin family.
   
 0.997
SMAX5B_020238
Transformation/transcription domain-associated protein; Belongs to the PI3/PI4-kinase family.
    
 0.995
SMAX5B_015561
Putative chromatin modification-related protein MEAF6.
    
 0.994
SMAX5B_014078
RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.
   
 0.994
SMAX5B_007829-2
Putative N-acyl-phosphatidylethanolamine-hydrolyzing phospholipase D isoform 2.
   
 0.993
SMAX5B_015697
Putative vacuolar protein sorting-associated protein 72-like.
    
 0.990
SMAX5B_014639
Putative MRG/MORF4L-binding protein.
    
 0.989
SMAX5B_016409
Putative opioid growth factor receptor-like protein 1.
    
 0.972
SMAX5B_010819
Putative E1A-binding protein p400.
   
 0.971
SMAX5B_020632
Putative helicase SRCAP-like.
   
 0.971
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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