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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_010936Putative GTPase-activating protein and VPS9 domain-containing protein 1-like. (1485 aa)    
Predicted Functional Partners:
SMAX5B_021493
Putative rab GTPase-binding effector protein 1 isoform 2.
   
 0.934
SMAX5B_020999
Putative rab GTPase-binding effector protein 2.
    
 0.898
SMAX5B_008591
RAB5C member RAS oncogene family.
    
 0.854
SMAX5B_015805
Ras-related protein rab-5a isoform 2.
    
 0.854
SMAX5B_018126
Ras-related protein rab-5a.
    
 0.854
SMAX5B_010763
RAB5B member RAS oncogene family.
    
 0.854
RAB17
Uncharacterized protein.
    
 0.854
SMAX5B_017459
Putative ras-related protein Rab-5C-like.
    
 0.854
SMAX5B_016941
Uncharacterized protein.
   
 0.847
SMAX5B_016005
Putative alsin.
   
 0.833
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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