STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_008898Ctbp1 wu:fi43a11; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (463 aa)    
Predicted Functional Partners:
SMAX5B_010299
Phosphoserine aminotransferase.
  
 0.976
SMAX5B_022214
Putative histone deacetylase 2-like.
   
 0.912
SMAX5B_003473
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
   
 0.902
SMAX5B_016328
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
   
 0.902
SMAX5B_011571
Putative lymphoid enhancer-binding factor 1-like.
    
 0.886
SMAX5B_004297
Putative transcription factor 7-like 2-like.
    
 0.886
ENSSMAP00000015627
Recombination signal binding protein for immunoglobulin kappa J region-like.
    
 0.878
ENSSMAP00000028529
annotation not available
    
 0.867
SMAX5B_017360
Putative transcription factor 7-like 2 isoform 2.
    
 0.867
SMAX5B_010171
Putative MDS1 and EVI1 complex locus protein EVI1-like.
    
 0.864
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.