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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_021001Cdc42-interacting protein 4. (644 aa)    
Predicted Functional Partners:
SMAX5B_012637
Putative intersectin-2.
   
 0.900
SMAX5B_008282
Putative intersectin-2.
   
 0.900
SMAX5B_007560
Putative rho-related GTP-binding protein RhoH.
    
 0.846
SMAX5B_008499
Ras-like family member Q.
    
 0.846
SMAX5B_005563
tRNA-splicing endonuclease subunit Sen2; Constitutes one of the two catalytic subunit of the tRNA- splicing endonuclease complex, a complex responsible for identification and cleavage of the splice sites in pre-tRNA. It cleaves pre-tRNA at the 5'- and 3'-splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2',3'-cyclic phosphate and 5'-OH termini. There are no conserved sequences at the splice sites, but the intron is invariably located at the same site in the gene, placing the splice sites an invariant distance from the constant structural [...]
    
   0.827
SMAX5B_007808
Putative neural Wiskott-Aldrich syndrome protein-like.
   
 0.812
SMAX5B_011656
Putative neural Wiskott-Aldrich syndrome protein-like.
   
 0.812
ENSSMAP00000021016
WASP actin nucleation promoting factor a.
   
 0.812
CDC42
Cell division control protein 42-like isoform 2.
    
 0.798
ENSSMAP00000029025
annotation not available
    
 0.798
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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