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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_015042Peptidyl-tRNA hydrolase putative. (184 aa)    
Predicted Functional Partners:
GATB
Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in the mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). Belongs to the GatB/GatE family. GatB subfamily.
    
  0.809
SMAX5B_004965
Putative transmembrane protein 109.
    
  0.809
SMAX5B_016605
Ubiquitin carboxyl-terminal hydrolase.
    
  0.673
SMAX5B_003547
Putative nuclear pore complex protein Nup155.
    
  0.571
SMAX5B_009713
Peptidylprolyl isomerase.
   
  0.530
TOMM20
Putative mitochondrial import receptor subunit TOM20-like.
   
 
 0.530
SMAX5B_022554
Peptidylprolyl isomerase.
   
  0.530
SMAX5B_021183
Putative mitochondrial import receptor subunit TOM20-like.
   
 
 0.530
ENSSMAP00000020570
Zgc:109986.
   
 
 0.483
SMAX5B_020984
Mitochondrial Rho GTPase.
    
  0.455
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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