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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_000723Putative vacuole membrane protein 1. (406 aa)    
Predicted Functional Partners:
SMAX5B_017287
Beclin-1.
    
 0.917
SMAX5B_013597
Autophagy-related protein 13; Belongs to the ATG13 family. Metazoan subfamily.
     
 0.893
ENSSMAP00000014357
annotation not available
     
 0.842
SMAX5B_005298
Putative tumor protein p53-inducible nuclear protein 1.
     
 0.835
SMAX5B_021633
Phosphatidylinositol 3-kinase catalytic subunit type 3.
    
 
 0.553
SMAX5B_012471
Putative transmembrane protein 41B.
    
 
 0.491
SMAX5B_011920
Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family.
      
 0.474
ENSSMAP00000023213
ATG7 autophagy related 7 homolog (S. cerevisiae).
   
  
 0.469
SMAX5B_000910
Autophagy-related protein 3.
   
  
 0.466
ENSSMAP00000027300
ATG5 autophagy related 5 homolog (S. cerevisiae).
      
 0.461
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.