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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_000724Putative tubulin delta chain; Belongs to the tubulin family. (458 aa)    
Predicted Functional Partners:
SMAX5B_020542
Gamma-tubulin complex component; Gamma-tubulin complex is necessary for microtubule nucleation at the centrosome; Belongs to the TUBGCP family.
   
 0.981
SMAX5B_007983
Gamma-tubulin complex component; Gamma-tubulin complex is necessary for microtubule nucleation at the centrosome; Belongs to the TUBGCP family.
    
 0.974
ENSSMAP00000032150
Tubulin, gamma complex associated protein 5.
    
 0.968
SMAX5B_016652
Gamma-tubulin complex component; Gamma-tubulin complex is necessary for microtubule nucleation at the centrosome; Belongs to the TUBGCP family.
   
 0.961
SMAX5B_021269
Putative gamma-tubulin complex component 6.
   
 0.961
SMAX5B_009498
WD_REPEATS_REGION domain-containing protein.
    
 0.929
SMAX5B_017014
Putative mitotic-spindle organizing protein 2-like.
    
 0.863
ENSSMAP00000000346
Pentatricopeptide repeat domain 1.
   
 0.795
SMAX5B_020850
DNA (cytosine-5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.
   
 0.795
SMAX5B_015873
Putative RNA-binding protein 48 isoform 3.
   
 0.795
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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