STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSMAP00000006790Peripherin. (502 aa)    
Predicted Functional Partners:
SMAX5B_001535
Putative alpha-internexin-like; Belongs to the intermediate filament family.
  
 
 
0.728
SMAX5B_008746
Putative alpha-internexin-like; Belongs to the intermediate filament family.
  
 
 
0.727
SMAX5B_010882
Putative neurofilament light polypeptide; Belongs to the intermediate filament family.
    
 
0.720
SMAX5B_015193
Putative neurofilament medium polypeptide; Belongs to the intermediate filament family.
    
 
0.720
NEFL
Putative neurofilament light polypeptide-like; Belongs to the intermediate filament family.
    
 
0.720
NEFH
Putative neurofilament heavy polypeptide; Belongs to the intermediate filament family.
    
 
0.679
SMAX5B_006954
Putative trichohyalin-like.
    
  0.643
SMAX5B_006301
Putative zona pellucida sperm-binding protein 4-like isoform 3.
    
  0.585
SMAX5B_010028
Uncharacterized protein.
    
  0.585
SMAX5B_009858
Putative zona pellucida sperm-binding protein 4-like.
    
  0.585
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.