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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_019903Putative TLC domain-containing protein 1-like. (258 aa)    
Predicted Functional Partners:
SMAX5B_020972
Putative dehydrogenase/reductase SDR family member 7B; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
    
 
 0.585
SMAX5B_004234
Putative dehydrogenase/reductase SDR family member 11; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
    
 
 0.520
SMAX5B_002821
Putative choline/ethanolaminephosphotransferase 1; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
      
 0.493
SMAX5B_021223
Putative ribonuclease P protein subunit p29.
      
 0.461
ENSSMAP00000006896
Tnf receptor-associated factor 4a.
      
 0.449
SMAX5B_020219
Putative dehydrogenase/reductase SDR family member 7C-A-like.
    
 
 0.428
SMAX5B_016031
Putative dehydrogenase/reductase SDR family member 7C-B-like isoform 2.
    
 
 0.428
SMAX5B_017770
Putative carbonyl reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
    
 
 0.408
SMAX5B_016796
Putative carbonyl reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
    
 
 0.408
SMAX5B_009013
Putative retinol dehydrogenase 12.
    
 
 0.405
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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