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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_010592Tubby-like protein; Belongs to the TUB family. (515 aa)    
Predicted Functional Partners:
SMAX5B_020312
Putative intraflagellar transport protein 140-like.
    
 0.820
IFT122
Putative intraflagellar transport protein 122-like.
    
 0.817
SMAX5B_018597
Putative tetratricopeptide repeat protein 21B.
    
 0.817
SMAX5B_007409
Putative WD repeat-containing protein 19.
    
 0.815
SMAX5B_015964
Putative WD repeat-containing protein 35.
    
 0.793
SMAX5B_018340
Putative G-protein coupled receptor 161; Belongs to the G-protein coupled receptor 1 family.
     
 0.698
IFT43
Putative intraflagellar transport protein 43-like.
    
 
 0.554
SMAX5B_005927
Putative ankyrin repeat domain-containing protein 54.
    
   0.541
SMAX5B_013452
Putative intraflagellar transport protein 80-like.
   
 0.510
SMAX5B_009663
Putative TBC1 domain family member 5.
    
 
 0.463
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.