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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_019362Putative homeobox protein MSH-D-like. (299 aa)    
Predicted Functional Partners:
SMAX5B_014271
Msx1 protein.
  
0.937
SMAX5B_017921
Putative homeobox protein MSX-2-like.
  
0.912
SMAX5B_007571
Putative homeobox protein MSH-C-like.
  
  
 
0.847
SMAX5B_009675
Putative homeobox protein DLX-5.
   
0.665
SMAX5B_008152
Runt-related transcription factor.
    
 0.632
SMAX5B_003435
Runt-related transcription factor.
    
 0.632
SMAX5B_022692
Runt-related transcription factor.
    
 0.632
SMAX5B_020126
Interferon regulatory factor 3.
      
 0.598
SMAX5B_008570
Putative runt-related transcription factor 3-like.
    
 0.594
ENSSMAP00000001657
annotation not available
   
 
 0.531
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.