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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_014274Putative G-protein coupled receptor 25; Belongs to the G-protein coupled receptor 1 family. (344 aa)    
Predicted Functional Partners:
SMAX5B_007298
Uncharacterized protein.
    
  0.695
SMAX5B_000198
Putative G-protein coupled receptor 176.
     
 0.584
SMAX5B_014362
Putative G-protein coupled receptor 84.
     
 0.554
SMAX5B_013423
Putative trafficking protein particle complex subunit 6B-like isoform 2.
      
 0.534
SMAX5B_021621
Putative HAUS augmin-like complex subunit 3.
    
 0.533
SMAX5B_014193
Putative G-protein coupled receptor 27.
     
 0.532
ENSSMAP00000000921
annotation not available
    
  0.515
SMAX5B_017380
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
      
 0.514
LGR5
Putative leucine-rich repeat-containing G-protein coupled receptor 5.
     
 0.513
SMAX5B_012713
Leucine-rich repeat-containing G protein-coupled receptor 4-like.
     
 0.513
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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