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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_0108584-hydroxyphenylpyruvate dioxygenase. (393 aa)    
Predicted Functional Partners:
SMAX5B_001914
Hgd protein.
  
 0.988
ENSSMAP00000000642
Tyrosine aminotransferase.
  
 
 0.955
SMAX5B_012704
Aspartate aminotransferase.
  
 
 0.905
SMAX5B_010314
Methylcrotonoyl-CoA carboxylase beta chain mitochondrial.
  
 
 0.902
SMAX5B_021929
Putative propionyl-CoA carboxylase beta chain mitochondrial.
  
 
 0.902
SMAX5B_020474
Putative methylcrotonoyl-CoA carboxylase beta chain mitochondrial-like.
  
 
 0.902
COQ2
4-hydroxybenzoate polyprenyltransferase, mitochondrial; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of coenzyme Q (CoQ) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate.
    
 0.876
SMAX5B_021114
Putative kynurenine/alpha-aminoadipate aminotransferase mitochondrial.
  
 
 0.876
SMAX5B_017972
Putative cell division cycle and apoptosis regulator protein 1 isoform 2.
     
 0.858
SMAX5B_014347
Negative elongation factor D.
  
 
 0.847
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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