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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_006209Methionine aminopeptidase; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val). (334 aa)    
Predicted Functional Partners:
SMAX5B_003670
Electron transfer flavoprotein subunit beta.
  
 
 0.938
SMAX5B_009880
Histidine ammonia-lyase; Belongs to the PAL/histidase family.
  
 
 0.917
SMAX5B_008348
Putative iodotyrosine dehalogenase 1 isoform 2.
  
 
 0.917
SMAX5B_015179
Putative cholesterol desaturase daf-36-like.
  
 
 0.915
SMAX5B_011918
Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial; Flavoprotein (FP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).
  
 
 0.913
SMAX5B_009376
Glutathione reductase; Maintains high levels of reduced glutathione in the cytosol. Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.
  
 
 0.902
SMAX5B_009859
Electron transfer flavoprotein subunit alpha mitochondrial.
   
 
 0.888
FAHD2A
Putative fumarylacetoacetate hydrolase domain-containing protein 2-like.
    
 0.880
SMAX5B_021035
Putative acylpyruvase FAHD1 mitochondrial.
    
 0.880
SMAX5B_020012
Fumarylacetoacetase.
    
 0.880
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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