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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_000595Putative ras-related protein ORAB-1-like. (214 aa)    
Predicted Functional Partners:
SMAX5B_002914
Trafficking protein particle complex subunit; May play a role in vesicular transport from endoplasmic reticulum to Golgi.
   
 0.958
SMAX5B_008008
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
    
 0.954
SMAX5B_000949
Putative trafficking protein particle complex subunit 8 isoform 2.
    
 0.952
SMAX5B_000622
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
    
 0.943
TRAPPC5
Trafficking protein particle complex subunit 5; May play a role in vesicular transport from endoplasmic reticulum to Golgi.
    
 0.930
SMAX5B_013423
Putative trafficking protein particle complex subunit 6B-like isoform 2.
    
 0.929
SMAX5B_018382
Isoform 2 of Trafficking protein particle complex subunit 2 isoform 2.
    
 0.928
SMAX5B_011550
Coronin; Belongs to the WD repeat coronin family.
   
 0.922
SMAX5B_002261
Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family.
   
 0.907
SMAX5B_000872
Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family.
   
 0.907
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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