Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
SMAX5B_008320Putative calmin-like. (874 aa)    
Predicted Functional Partners:
SMAX5B_007222
Putative SUN domain-containing protein 1-like.
    
 0.755
SMAX5B_020739
Putative SUN domain-containing protein 1.
    
 0.755
SMAX5B_007638
Putative nesprin-3.
    
  0.574
SMAX5B_017341
Nebulin-related-anchoring protein.
      
 0.569
SMAX5B_020238
Transformation/transcription domain-associated protein; Belongs to the PI3/PI4-kinase family.
    
 0.567
SMAX5B_014306
Putative transcriptional adapter 3.
    
 0.565
SMAX5B_012103
Transcription initiation factor TFIID subunit 12 isoform 2.
    
 0.551
SMAX5B_008687
Putative transcription initiation protein SPT3-like.
    
 0.550
SMAX5B_007640
Putative calmin.
     
 
0.540
SMAX5B_003272
Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family.
    
  0.536
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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