STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_009608Putative replication factor C subunit 4. (358 aa)    
Predicted Functional Partners:
SMAX5B_006797
AAA domain-containing protein.
   
0.999
SMAX5B_010392
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
  
 0.999
SMAX5B_016147
Replication factor C subunit RFC5.
  
0.999
SMAX5B_014823
Putative replication factor C subunit 2.
  
0.999
SMAX5B_013860
Rad1 protein isoform 2.
   
 0.994
SMAX5B_007498
Replication factor C subunit 1.
   
 0.994
SMAX5B_011057
Putative ankyrin repeat domain-containing protein 32.
  
 0.993
ENSSMAP00000017114
HUS1 checkpoint clamp component.
   
 0.993
SMAX5B_016376
DNA primase; Belongs to the eukaryotic-type primase small subunit family.
   
 0.991
ENSSMAP00000017531
annotation not available
   
 0.991
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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