Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_014939Homeobox protein Hox-C12a. (275 aa)    
Predicted Functional Partners:
SMAX5B_003272
Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family.
      
 0.660
EZH1
Putative histone-lysine N-methyltransferase EZH1-like.
    
 
 0.592
SMAX5B_009688
Putative histone-lysine N-methyltransferase EZH2.
    
 
 0.592
SMAX5B_009926
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex.
    
 
 0.532
SMAX5B_007155
Putative dnaJ-like subfamily C member 24.
      
 0.530
SMAX5B_014069
Putative musculoskeletal embryonic nuclear protein 1-like.
    
 
 0.516
SMAX5B_014165
Putative musculoskeletal embryonic nuclear protein 1 isoform 2.
    
 
 0.506
SMAX5B_000988
Urotensin II.
      
 0.503
SMAX5B_020715
Putative E3 ubiquitin-protein ligase MGRN1.
      
 0.464
ENSSMAP00000021090
SRA stem-loop interacting RNA binding protein.
      
 0.460
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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