Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ENSSMAP00000007257Leucine rich repeat containing 18a. (260 aa)    
Predicted Functional Partners:
SMAX5B_006229
Developmentally regulated GTP binding protein 2 isoform 2.
      
 0.677
ENSSMAP00000011072
ATPase H+ transporting accessory protein 1 like b.
      
 0.656
SMAX5B_017924
Putative WD repeat-and FYVE domain-containing protein 4.
    
 
 0.624
LGR5
Putative leucine-rich repeat-containing G-protein coupled receptor 5.
  
 
  0.607
SMAX5B_005730
Eukaryotic initiation factor 4A-II; Belongs to the DEAD box helicase family.
    
 0.575
SMAX5B_015209
Putative leucine-rich repeat transmembrane neuronal protein 4-like.
  
 
   0.561
SMAX5B_022109
Putative RING finger protein 141.
      
 0.547
POLR2E
Polymerase (RNA) II (DNA directed) polypeptide E isoform 2.
    
 
 0.546
SMAX5B_020224
COP9 signalosome complex subunit 3.
    
 0.534
SMAX5B_014936
Putative fibromodulin.
  
     0.529
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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