SMAX5B_011512 protein (Scophthalmus maximus)

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[Homology]

Score

SMAX5B_011512

Sm domain-containing protein. (177 aa)

Predicted Functional Partners:

SMAX5B_007936

0.999

LSM3

0.999

ENSSMAP00000006780

0.999

LSM1

0.999

ENSSMAP00000012812

0.999

LSM8

0.999

ENSSMAP00000034357

0.999

ENSSMAP00000005552

0.998

SART1

0.996

SMAX5B_016489

0.996

Your Current Organism:

Scophthalmus maximus

NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSMAP00000005552	ENSSMAP00000006780	ENSSMAP00000005552	ENSSMAP00000006780	Small nuclear ribonucleoprotein D2 polypeptide.	LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated.	0.998
ENSSMAP00000005552	ENSSMAP00000012812	ENSSMAP00000005552	ENSSMAP00000012812	Small nuclear ribonucleoprotein D2 polypeptide.	LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated.	0.997
ENSSMAP00000005552	ENSSMAP00000034357	ENSSMAP00000005552	ENSSMAP00000034357	Small nuclear ribonucleoprotein D2 polypeptide.	LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated.	0.997
ENSSMAP00000005552	LSM1	ENSSMAP00000005552	ENSSMAP00000007979	Small nuclear ribonucleoprotein D2 polypeptide.	U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs.	0.780
ENSSMAP00000005552	LSM3	ENSSMAP00000005552	ENSSMAP00000002937	Small nuclear ribonucleoprotein D2 polypeptide.	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.994
ENSSMAP00000005552	LSM8	ENSSMAP00000005552	ENSSMAP00000015433	Small nuclear ribonucleoprotein D2 polypeptide.	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.996
ENSSMAP00000005552	SART1	ENSSMAP00000005552	ENSSMAP00000001648	Small nuclear ribonucleoprotein D2 polypeptide.	Putative U4/U6.U5 tri-snRNP-associated protein 1.	0.995
ENSSMAP00000005552	SMAX5B_007936	ENSSMAP00000005552	ENSSMAP00000001791	Small nuclear ribonucleoprotein D2 polypeptide.	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.999
ENSSMAP00000005552	SMAX5B_011512	ENSSMAP00000005552	ENSSMAP00000007346	Small nuclear ribonucleoprotein D2 polypeptide.	Sm domain-containing protein.	0.998
ENSSMAP00000005552	SMAX5B_016489	ENSSMAP00000005552	ENSSMAP00000024115	Small nuclear ribonucleoprotein D2 polypeptide.	Putative squamous cell carcinoma antigen recognized by T-cells 3.	0.485
ENSSMAP00000006780	ENSSMAP00000005552	ENSSMAP00000006780	ENSSMAP00000005552	LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated.	Small nuclear ribonucleoprotein D2 polypeptide.	0.998
ENSSMAP00000006780	ENSSMAP00000012812	ENSSMAP00000006780	ENSSMAP00000012812	LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated.	LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated.	0.999
ENSSMAP00000006780	ENSSMAP00000034357	ENSSMAP00000006780	ENSSMAP00000034357	LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated.	LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated.	0.999
ENSSMAP00000006780	LSM1	ENSSMAP00000006780	ENSSMAP00000007979	LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated.	U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs.	0.999
ENSSMAP00000006780	LSM3	ENSSMAP00000006780	ENSSMAP00000002937	LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated.	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.996
ENSSMAP00000006780	LSM8	ENSSMAP00000006780	ENSSMAP00000015433	LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated.	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.999
ENSSMAP00000006780	SART1	ENSSMAP00000006780	ENSSMAP00000001648	LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated.	Putative U4/U6.U5 tri-snRNP-associated protein 1.	0.997
ENSSMAP00000006780	SMAX5B_007936	ENSSMAP00000006780	ENSSMAP00000001791	LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated.	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.999
ENSSMAP00000006780	SMAX5B_011512	ENSSMAP00000006780	ENSSMAP00000007346	LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated.	Sm domain-containing protein.	0.999
ENSSMAP00000006780	SMAX5B_016489	ENSSMAP00000006780	ENSSMAP00000024115	LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated.	Putative squamous cell carcinoma antigen recognized by T-cells 3.	0.996