STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSMAP00000007360Retinaldehyde binding protein 1b. (309 aa)    
Predicted Functional Partners:
SMAX5B_004193
Putative ankyrin repeat and FYVE domain-containing protein 1; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.606
SMAX5B_001894
Retinol dehydrogenase 10-A; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
  0.557
SMAX5B_002216
Putative retinol dehydrogenase 10-like; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
  0.557
SMAX5B_016436
Putative short-chain dehydrogenase/reductase 3; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
  0.557
SMAX5B_016209
Putative epidermal retinol dehydrogenase 2 isoform 2; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
  0.557
SMAX5B_015302
Putative dnaJ-like subfamily C member 10.
   
 0.541
SMAX5B_010325
Putative selenocysteine insertion sequence-binding protein 2.
   
 
 0.537
SECISBP2L
Putative selenocysteine insertion sequence-binding protein 2-like.
   
 
 0.537
SMAX5B_011377
Putative thioredoxin domain-containing protein 11.
   
 
 0.512
SMAX5B_008862
ADP-ribosylation factor-like 3 like 1; Belongs to the small GTPase superfamily. Arf family.
   
  0.502
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.