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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_001785Cytochrome c heme lyase; Links covalently the heme group to the apoprotein of cytochrome c. (289 aa)    
Predicted Functional Partners:
SMAX5B_017336
Sulfotransferase; Belongs to the sulfotransferase 1 family.
   
 
 0.955
SMAX5B_003025
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
     
 0.877
SMAX5B_018049
Putative cytochrome c oxidase assembly protein COX15-like.
 
  
 
 0.855
SMAX5B_020911
Putative heme oxygenase 2.
     
 0.842
SMAX5B_006061
Heme oxygenase; Heme oxygenase cleaves the heme ring at the alpha methene bridge to form biliverdin. Biliverdin is subsequently converted to bilirubin by biliverdin reductase.
     
 0.819
SMAX5B_007382
Heme oxygenase 1.
     
 0.819
SMAX5B_006127
Putative NADH dehydrogenase isoform 2.
   
  
 0.816
SMAX5B_012858
Cytochrome c domain-containing protein.
   
 
 0.797
ENSSMAP00000004031
Mitochondrial ribosomal protein L35.
   
  
 0.640
SMAX5B_000694
LisH domain-containing protein.
    
 
 0.637
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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