STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSMAP00000007367Homeobox C6a. (234 aa)    
Predicted Functional Partners:
SMAX5B_014800
Putative homeobox protein Hox-C9.
   
 
0.972
ENSSMAP00000007370
Homeobox C5a.
   
  
0.950
ENSSMAP00000026391
annotation not available
   
 
0.871
SMAX5B_015023
Homeobox protein HoxC4aa.
  
 
0.862
SMAX5B_008613
HoxD4b.
   
 
0.857
ENSSMAP00000024818
annotation not available
   
 
0.857
HOXA7
Homeobox A7.
   
  
0.830
ENSSMAP00000015550
Homeobox B6b.
  
  
0.784
ENSSMAP00000024863
Homeobox D4a.
   
  
0.779
ENSSMAP00000026397
annotation not available
   
  
0.779
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.